Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PAAD rs514534 chr11:74676794 G/C 9.38E-5 178 4.27 15.38 15.67 KM Plot
PAAD rs517666 chr11:74554147 C/T 0.000126 178 15.62 15.43 4.27 KM Plot
PAAD rs526405 chr2:44855568 C/T 7.84E-5 178 15.57 15.4 5.55 KM Plot
PAAD rs528015 chr6:44905145 C/T 0.000164 178 16.6 15.67 13.13 KM Plot
PAAD rs55634432 chr5:140524864 C/T 1.72E-5 177 15.95 14.33 7.85 KM Plot
PAAD rs55643926 chr1:227575629 C/T 6.61E-5 176 15.53 15.65 3.9 KM Plot
PAAD rs55697022 chr15:81567474 T/G 4.83E-5 176 15.57 15.72 1.37 KM Plot
PAAD rs55702905 chr6:50386888 T/A 0 178 15.57 14.35 0.4 KM Plot
PAAD rs55709051 chr8:140841429 T/C 1.48E-7 173 15.23 16.13 3.17 KM Plot
PAAD rs55720407 chr7:6181069 G/A 0 175 15.4 15.77 1.03 KM Plot
PAAD rs55790444 chr7:20648253 A/G 1.81E-6 178 15.53 15.57 3.67 KM Plot
PAAD rs55795700 chr8:140840120 G/C 1.63E-7 172 15.33 16.13 3.17 KM Plot
PAAD rs55819290 chr8:81518764 A/G 8.21E-5 175 15.43 14.67 3.9 KM Plot
PAAD rs55846622 chr5:141265060 T/C 3.03E-5 174 15.42 15.87 3.9 KM Plot
PAAD rs55849132 chr19:41546555 T/C 0.000149 172 16.12 15.43 8.23 KM Plot